rs6439443 chr3:133822071 T>C

Sequence
ctctctccactcaggtggtgccct[T/C]ttgtggccctgagggcatttgact
ASB in cell types
GBM39 (Human brain tumor) renal cortex
ASB for transcription factors
CREB1_HUMAN SMC3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN n/a 2.30 1.000.02 1.00 n/a No Hit
SMC3_HUMAN -4.37 2.47 1.000.02 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP carbohydrate-deficient transferrin (percent of total transferrin),  microalbuminuria,  urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Nerve_Tibial,  Pancreas,  Skin_Sun_Exposed_Lower_leg

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