rs6440172 chr3:143423839 C>T
- Sequence
tagtaacaggacaagtccaaatca[C/T]gtgccaactgatggcatgtgacaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RAD51_HUMAN BHE40_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | 3.65 | -3.53 | 1.00 | n/a | n/a | |||
| BHE40_HUMAN | 3.69 | -3.83 | 1.00 | -5.07 | Concordant |
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Motif analysis
