rs6441874 chr3:44976413 G>T

Sequence
tcgcggcctgccctgggtttgcca[G/T]tgaggaggcagccgagctgcggcg
ASB in cell types
RKO (colon carcinoma cell)
ASB for transcription factors
TYY1_HUMAN RBBP5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN -0.29 2.65 0.913.0·10-3 1.50 n/a No Hit
RBBP5_HUMAN 2.00 n/a 9.6·10-31.00 2.50 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP autism hdl cholesterol
GTEx eQTL Artery_Aorta Artery_Tibial Brain_Cortex Brain_Spinal_cord_cervical_c-1 Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Testis Thyroid Whole_Blood

Download