rs6441888 chr3:45092414 C>T
- Sequence
gcaaagctgaaagagctcctgaca[C/T]gtcaactaatcccttccttacctt
- ASB in cell types
- foreskin keratinocyte BEAS-2B (bronchial epithelium) MCF10A (breast epithelial cells) primary human neonatal keratinocytes
- ASB for transcription factors
- GCR_HUMAN CTCF_HUMAN TEAD4_HUMAN ANM1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.55 | -0.20 | 1.04 | n/a | No Hit | |||
| CTCF_HUMAN | 1.84 | 1.07 | 1.39 | n/a | No Hit | |||
| TEAD4_HUMAN | 2.64 | -2.35 | 1.00 | n/a | No Hit | |||
| ANM1_HUMAN | 2.06 | -1.32 | 2.00 | n/a | n/a |
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