rs6441991 chr3:46442792 T>A

Sequence
gtcgtgaaatgtactcttggcaaa[T/A]ggaggaaaaggaacaggggaagat
ASB in cell types
testis
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.08 0.47 1.5·10-31.00 1.08 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP celiac disease,  hdl cholesterol,  ldl cholesterol,  simpson-angus scale,  total cholesterol,  triglycerides,  type 1 diabetes, rheumatoid arthritis, combined case analysis
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal

Download