rs6442551 chr3:15769098 C>T

Sequence
taaatatgatcagatttagtcaaa[C/T]tgagaaacatctattgcaccagat
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN n/a 1.59 1.000.04 4.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  chronic kidney disease,  cystatin c in serum,  fasting insulin,  homa-b,  homa-ir
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Liver,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid,  Whole_Blood

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