rs6443477 chr3:177590145 A>C
- Sequence
atgactcaactctgacctgtcatg[A/C]agtgtttgatatttatatttctgg
- ASB in cell types
- Detroit 562 (Pharyngeal squamous cell carcinoma) HEK293 (embryonic kidney) MM1.S (plasma cell myeloma) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- PRDM6_HUMAN MBD4_HUMAN TF65_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRDM6_HUMAN | n/a | 3.45 | 2.00 | n/a | No Hit | |||
| MBD4_HUMAN | -0.26 | 1.37 | 1.12 | n/a | n/a | |||
| TF65_HUMAN | -1.19 | 1.87 | 2.10 | n/a | No Hit | |||
| IKZF1_HUMAN | 0.29 | 1.72 | 2.33 | n/a | No Hit | |||
| TWST1_HUMAN | -0.07 | 2.38 | 1.00 | n/a | No Hit |
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