rs6443974 chr3:184482796 C>T

Sequence
cacggtgctctaaaagctggccat[C/T]gtcatcattttggtccgcgcacac
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN335_HUMAN ZN398_HUMAN ZBT26_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN335_HUMAN 3.19 n/a 4.2·10-41.00 1.00 n/a No Hit
ZN398_HUMAN 2.52 -4.52 0.021.00 1.50 n/a n/a
ZBT26_HUMAN 2.42 -2.26 0.031.00 1.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Skin_Not_Sun_Exposed_Suprapubic

Download