rs6444839 chr3:165470776 C>A
- Sequence
ccctcaagtctaggaagaaaactt[C/A]agtaaacaacaagtggtgtaactc
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.52 | 2.10 | 2.25 | 4.15 | Concordant |
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Motif analysis
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, hdl cholesterol, microalbuminuria, parkinsons disease, triglycerides