rs6444987 chr3:171428837 T>C
- Sequence
attccttccatagcctcctctttc[T/C]ctttcattgtctcctcctttttct
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SPI1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.76 | 1.57 | 1.56 | -1.02 | Weak Discordant | |||
| IKZF2_HUMAN | -1.86 | 2.31 | 1.00 | n/a | n/a |
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Motif analysis
