rs6445853 chr3:57100087 A>G

Sequence
ttttctagttccaaattttctaca[A/G]taactattacactaataactggaa
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines) MCF10A (breast epithelial cells)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.88 0.85 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol hypertension (early onset hypertension) lp-pla2 activity lp-pla2 mass premature ovarian failure primary rhegmatogenous retinal detachment sporadic creutzfeldt-jakob disease
GTEx eQTL Nerve_Tibial

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