rs6445927 chr3:57755619 A>G

Sequence
ccctcttttttcactttggaaatt[A/G]ttcaatctctctttggaagaaaca
ASB in cell types
GM19239 (male B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.08 0.94 0.030.64 1.03 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI white blood cell count
GRASP alzheimers disease birth weight sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Colon_Sigmoid Colon_Transverse Muscle_Skeletal Ovary Pancreas Stomach Testis Whole_Blood

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