rs6446607 chr4:7533487 T>C
- Sequence
gagttcctgtccatccagccgatc[T/C]ggtcctggtggccttccagcggct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN GRHL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -1.15 | 2.11 | 2.60 | 0.14 | Weak Concordant | |||
| GRHL2_HUMAN | -0.90 | 2.34 | 3.00 | n/a | No Hit |
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Motif analysis
