rs6448414 chr4:25914204 G>A

Sequence
tcgtccctccctcaaggcccggaa[G/A]cgaaagcctctccacctcttccga
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.58 n/a 2.1·10-51.00 2.00 n/a No Hit
ANDR_HUMAN 2.74 -5.07 0.011.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  ldl cholesterol,  microalbuminuria,  serum creatinine,  total cholesterol
GTEx eQTL Cells_EBV-transformed_lymphocytes,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen

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