rs6451662 chr5:43008815 A>G

Sequence
accaggcaccagctctgctccccg[A/G]ctcacgggagaaagctagttagta
ASB for transcription factors
ETS1_HUMAN FOXP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ETS1_HUMAN 1.79 -1.46 0.021.00 1.00 n/a No Hit
FOXP1_HUMAN -0.38 2.13 1.000.05 1.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  hypertension (early onset hypertension),  triglycerides change with statins
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Spleen,  Testis,  Whole_Blood

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