rs6452788 chr5:88417096 G>A
- Sequence
gtatataattcaggaaagtcagtc[G/A]gagaagagctgaaagagatcttgg
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.38 | -0.61 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), hdl cholesterol, obesity with early age of onset (age >2), systolic blood pressure (sbp)
GTEx eQTL Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Esophagus_Muscularis, Testis