rs6453009 chr5:73519991 A>G

Sequence
cccaaggtctggaagggccagaag[A/G]tactcatgcctgtcccatgctact
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.06 0.03 2.6·10-31.00 1.60 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  hdl cholesterol,  parkinsons disease
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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