ADASTRA v5.1.3
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rs6453048
chr5:74315020
T
>
C
Sequence
aactcaacctcagtgcataaccca[T/C]ggctagtaaagtggtcaaaagaag
ASB in cell types
MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GRHL2_HUMAN
GATA3_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN
-0.11
0.99
1.00
0.01
1.92
n/a
No Hit
GATA3_HUMAN
-0.23
2.13
0.90
0.05
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)