rs6453048 chr5:74315020 T>C

Sequence
aactcaacctcagtgcataaccca[T/C]ggctagtaaagtggtcaaaagaag
ASB in cell types
MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GRHL2_HUMAN GATA3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN -0.11 0.99 1.000.01 1.92 n/a No Hit
GATA3_HUMAN -0.23 2.13 0.900.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Nerve_Tibial Testis

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