rs6453375 chr5:78222203 G>C
- Sequence
gctgtcatggccagtcagtctcag[G/C]ggatccagtagctgctgcaggttg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.81 | 0.29 | 1.27 | n/a | No Hit | |||
| ATF2_HUMAN | 2.28 | 0.31 | 1.00 | n/a | No Hit |
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