rs6454752 chr6:89308642 C>T
- Sequence
tgcctggcccagcttctcactgcc[C/T]cagacctcccagtcatttccccac
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ETS1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETS1_HUMAN | n/a | 2.58 | 3.00 | n/a | No Hit | |||
| SMCA4_HUMAN | n/a | 1.97 | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP fasting blood glucose, height, homa-b, resistance to kuru in aged women despite likely exposure, salmonella-induced pyroptosis, tetrology of fallot
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood