rs6455580 chr6:158335800 A>G

Sequence
acagcacatggtgtgccattatgt[A/G]tacacatatactactgtatatcgt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 3.17 1.009.3·10-3 2.00 2.20 Concordant
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GRASP fasting blood glucose,  fasting insulin,  hdl cholesterol change with statins,  height,  homa-ir
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Muscle_Skeletal,  Pancreas,  Stomach,  Thyroid,  Whole_Blood

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