rs6455609 chr6:158870458 G>C

Sequence
agtctgtgacgctgaacacatcag[G/C]aaacctcaaactttccccatcttt
ASB in cell types
K562 (myelogenous leukemia) HCT-116 (colon carcinoma)
ASB for transcription factors
MBD4_HUMAN NRF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBD4_HUMAN 2.05 -0.53 5.5·10-40.99 1.00 n/a n/a
NRF1_HUMAN -1.39 1.84 1.001.0·10-2 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels
GTEx eQTL Muscle_Skeletal

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