rs6455972 chr6:164927680 T>G
- Sequence
tgaagatgaatggaaatgaaggag[T/G]gcattttcaacagagcctggtgcc
- ASB in cell types
- A549 (lung carcinoma) THP-1 (acute monocytic leukemia) erythroid cells
- ASB for transcription factors
- SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.27 | 0.05 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. alzheimers disease without psychotic symptoms), alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. controls), body mass index (bmi), lung function, forced expiratory volume in 1 second (fev1) percent predicted (in nonasthmatic participants)