rs6458815 chr6:13423183 T>C
- Sequence
ataagggaatgaaaccccagacag[T/C]gttagatttcaagataaatataga
- ASB in cell types
- renal cortex
- ASB for transcription factors
- SIX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIX2_HUMAN | 1.46 | -0.59 | 1.17 | -4.39 | Concordant |
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Motif analysis
Genetic associations
GRASP adiponectin levels, diabetic retinopathy in type 2 diabetes mellitus, salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Pituitary