rs6459716 chr7:156928271 T>C

Sequence
caggagctgggcaagtggctcaag[T/C]atgtgcactaagaggcaaacctgg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) 22RV1 (prostate carcinoma)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -4.03 1.80 1.000.03 2.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP birth weight,  college completion,  hdl cholesterol,  years of education
GTEx eQTL Artery_Coronary,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Testis

Download