rs6459914 chr7:155724638 C>T
- Sequence
ttgagcgtacaggtgtgtgagttt[C/T]gcctagtgcctacagttatataat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM18951 (B-cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.58 | -0.70 | 1.04 | n/a | n/a | |||
| CTCF_HUMAN | 1.44 | 1.11 | 1.38 | -3.17 | Concordant |
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Motif analysis
