rs6462926 chr7:39510932 T>A

Sequence
tgaaggagaaagaaagcacatctt[T/A]catggtggcaggagagagagcgtg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MTA2_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTA2_HUMAN 3.14 -3.48 8.9·10-41.00 1.00 n/a n/a
IKZF2_HUMAN 2.22 -1.74 2.0·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Lung Skin_Sun_Exposed_Lower_leg Testis Thyroid

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