rs6463110 chr7:42429586 C>T
- Sequence
tcccttgttcttatgtgatgtttc[C/T]tgcaatgaccaagccaaacacagt
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.44 | n/a | 2.00 | -0.46 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP birth weight, hdl cholesterol, obesity with early age of onset (age >2), rheumatoid arthritis, total cholesterol