rs6464911 chr7:148557112 A>G
- Sequence
tacttgatccttgtttactgggag[A/G]agtttctctgttgcctcaggtaat
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12891 (male B- cells lymphoblastoid cell line) HUES64 (embryonic stem cells) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN SRBP1_HUMAN RFX5_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.06 | 1.66 | 2.02 | n/a | No Hit | |||
| SRBP1_HUMAN | -3.77 | 3.82 | 1.00 | n/a | No Hit | |||
| RFX5_HUMAN | -2.92 | 3.32 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | n/a | 2.59 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.14 | 1.37 | 1.72 | n/a | No Hit |
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