rs6466120 chr7:106542630 C>A

Sequence
caagaactagagtcaagttcactc[C/A]actaaatatcatacctgccaggag
ASB in cell types
K562 (myelogenous leukemia) A549 (lung carcinoma) AG09319 (fibroblasts) GBM39 (Human brain tumor)
ASB for transcription factors
RING2_HUMAN SMC3_HUMAN ENL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RING2_HUMAN -2.81 1.89 1.008.3·10-3 1.67 n/a n/a
SMC3_HUMAN 1.34 0.09 0.011.00 2.00 n/a n/a
ENL_HUMAN -1.94 1.58 1.000.04 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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