rs6468663 chr8:99098282 T>C

Sequence
gggtggagtgtttactttatctta[T/C]ccagaactgaaaccggttaacatt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GATA3_HUMAN GRHL2_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN 2.89 -2.77 1.6·10-31.00 1.00 n/a No Hit
GRHL2_HUMAN 2.48 n/a 0.031.00 2.00 n/a No Hit
FOXA1_HUMAN 0.79 0.19 0.041.00 1.85 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Esophagus_Muscularis Muscle_Skeletal Testis

Download