rs6470127 chr8:122969859 G>A

Sequence
gttctcctgggaaaattaaagaga[G/A]acagaaacagaaagctgtcacatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
IKZF2_HUMAN COE1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.29 1.84 1.000.01 1.00 n/a n/a
COE1_HUMAN -1.85 2.15 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol infant head circumference ldl cholesterol
GTEx eQTL Pancreas

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