rs6472241 chr8:65998296 G>C

Sequence
ctccgtgctgggggaaccactact[G/C]tcttcaaagttgtcagacagggac
ASB in cell types
LNCaP C4-2B (prostate carcinoma) K562 (myelogenous leukemia)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -1.01 2.71 1.005.3·10-5 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI eosinophil counts
GTEx eQTL Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Muscle_Skeletal Nerve_Tibial Thyroid

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