rs6472632 chr8:71829629 A>G

Sequence
taaaattttcctaggtattgcata[A/G]tttggggccataattttacattgt
ASB in cell types
SUM159PT (Triple negative breast cancer) BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.01 -0.58 6.6·10-31.00 1.00 n/a No Hit
CEBPB_HUMAN 1.62 0.67 0.031.00 1.95 -7.69 Concordant
Items per page:
1 – 2 of 2

Motif analysis

CEBPB_HUMAN Concordant
CEBPB_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd hdl cholesterol
GTEx eQTL Lung Testis

Download