rs6472903 chr8:75318066 G>T
- Sequence
caagctgccaggatataatacttg[G/T]gtattcagtaaatattgactgatt
- ASB in cell types
- 22RV1 (prostate carcinoma) ZR-75-1 (invasive ductal carcinoma) CWR22 (prostate carcinoma) primary prostate cancer
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.94 | 2.70 | 1.46 | 4.59 | Concordant | |||
| ANDR_HUMAN | -0.95 | 3.41 | 1.70 | n/a | No Hit | |||
| HXB13_HUMAN | n/a | 3.25 | 2.00 | n/a | No Hit |
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Motif analysis
