rs6474493 chr8:38714416 A>G
- Sequence
aaaaacaaaaaactaggtgaagac[A/G]tggacgcccatcactaaccagcta
- ASB in cell types
- HEK293 (embryonic kidney) hepatocytes GM12878 (female B-cells lymphoblastoid cell line) Jurkat (T-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.78 | 0.33 | 1.88 | |||
| hepatocytes | 1.76 | -0.85 | 1.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | -1.96 | 2.24 | 1.00 | |||
| Jurkat (T-cells) | 1.99 | -0.35 | 1.28 | |||
| EOL-1 (Acute myeloid leukemia) | n/a | 1.57 | 2.00 |
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