rs6476733 chr9:38708188 G>A
- Sequence
agtggatgcattctctatctgcag[G/A]tagaacctatgtctttcttcctta
- ASB in cell types
- foreskin keratinocyte GM12891 (male B- cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.08 | 0.23 | 1.41 | n/a | No Hit | |||
| STAG1_HUMAN | 1.46 | -0.09 | 1.19 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP height, hip bone mineral density (bmd), mitral annular calcium, premature ovarian failure, primary rhegmatogenous retinal detachment, spine bone mineral density (bmd)