rs6476798 chr9:4048636 A>G
- Sequence
tctcttcaaagagagcacaaaagc[A/G]tcttttaagaccatgatcaatagg
- ASB in cell types
- bipolar neuron IPSC-derived bipolar neuron 22RV1 (prostate carcinoma) RH4 (alveolar rhabdomyosarcoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.30 | 2.25 | 1.11 | n/a | No Hit | |||
| RAD21_HUMAN | -1.32 | 2.25 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -0.40 | 1.32 | 1.00 | n/a | n/a |
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