ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs6477858
chr9:111898172
T
>
G
Sequence
tgggtgatggcgtgaatagagaca[T/G]gggttatgtggctagtttggtata
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.94
0.92
1.5·10
-3
0.34
1.06
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
hdl cholesterol
,
hip bone mineral density (bmd)
,
hypertension (early onset hypertension)
,
infant head circumference
,
premature ovarian failure
,
spine bone mineral density (bmd)
GTEx eQTL
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale