rs6479744 chr10:60989635 T>C
- Sequence
tctaacctctgccttagcaccttg[T/C]ttcctgtgctgagacagtgacgtc
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) breast tumor xenograft
- ASB for transcription factors
- FLI1_HUMAN SPI1_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FLI1_HUMAN | 2.31 | -2.19 | 1.00 | 1.94 | Weak Discordant | |||
| SPI1_HUMAN | 1.36 | -0.05 | 1.20 | n/a | No Hit | |||
| ETS1_HUMAN | 1.69 | -1.64 | 1.00 | 1.65 | Weak Discordant |
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Motif analysis
