rs648097 chr1:18342956 G>A
- Sequence
agttctcttgggtatgtatccttg[G/A]agtagaactgctgagtcaaacaat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | -1.78 | 2.05 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -2.11 | 2.14 | 1.25 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.08 | 2.28 | 1.50 | n/a | n/a |
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