rs6481946 chr10:35240186 A>G

Sequence
agtcgcgctgactaaaatttgcta[A/G]ctgacctctagagggagccaaatt
ASB in cell types
foreskin keratinocyte erythroid progenitors liver HS-SY-2(Monophasic synovial sarcoma)
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Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 0.87 n/a 1.2·10-41.00 2.67
erythroid progenitors 2.86 -5.08 2.2·10-31.00 2.00
liver 1.73 -0.72 5.3·10-31.00 1.50
HS-SY-2(Monophasic synovial sarcoma) 1.87 -0.46 0.020.99 3.00
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Motif analysis

No data available

Genetic associations

EMBL-EBI hair color
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Lung,  Muscle_Skeletal,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

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