rs6483634 chr11:20035825 T>G
- Sequence
atgtggagatgagtcacatctgag[T/G]caagagagctttgtccggggcttc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HCASMC (Human coronary artery smooth muscle cells) breast tumor MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN FOS_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.49 | 1.47 | 2.17 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.48 | 0.09 | 1.90 | n/a | No Hit | |||
| FOS_HUMAN | 1.03 | n/a | 2.00 | n/a | n/a | |||
| TCF21_HUMAN | n/a | 2.89 | 3.00 | n/a | n/a | |||
| GATA3_HUMAN | 1.20 | -1.18 | 1.97 | n/a | No Hit |
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