ADASTRA v5.1.3
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rs6486307
chr11:9384476
C
>
T
Sequence
acttgaacatttttcgtttttgaa[C/T]agaaagacttgtctgtaggaacga
ASB in cell types
K562 (myelogenous leukemia)
MS-1 (Small cell lung carcinoma)
ASB for transcription factors
ENL_HUMAN
E2F1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN
1.94
-0.74
2.1·10
-3
1.00
1.83
n/a
n/a
E2F1_HUMAN
1.96
-0.12
3.5·10
-3
0.97
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
hdl cholesterol
,
obesity (body mass index (bmi))
GTEx eQTL
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Pituitary
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)