rs6488100 chr12:9668023 C>T

Sequence
aaattccaagataagtgtggaaat[C/T]tcaatttatcagggtttacctttt
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN n/a 1.31 1.000.03 4.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  homa-b,  infant head circumference,  total cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Stomach,  Testis,  Thyroid,  Whole_Blood

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