rs6488610 chr12:7734414 T>C

Sequence
aatcagacctcatatagattatga[T/C]ctggctttgaatcatttggatatt
ASB in cell types
22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.26 n/a 0.011.00 2.00 n/a No Hit
FOXA1_HUMAN 1.54 -0.95 0.031.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease
GTEx eQTL Testis Whole_Blood

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