rs6489520 chr12:4153696 A>G
- Sequence
tggagtcctcagcaaggtcttggc[A/G]ctattctggggtgttccccagctc
- ASB in cell types
- CD14+ monocytes GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 3.66 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, bipolar disorder and schizophrenia, major depressive disorder, rheumatoid arthritis, salmonella-induced pyroptosis, schizophrenia, triglycerides, triglycerides change with statins