rs6489690 chr12:643161 C>A
- Sequence
gcctgcgccgctctgtccccctgc[C/A]gctgcccaagcctccagcaggggc
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.54 | 2.88 | 1.46 | n/a | No Hit | |||
| STAG1_HUMAN | -1.24 | 2.01 | 1.50 | n/a | n/a |
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