rs6490265 chr12:119667902 T>C

Sequence
tcgagatagcctcgcgcgtttagc[T/C]ggccgccgccacctccacgcccta
ASB in cell types
K562 (myelogenous leukemia) foreskin keratinocyte keratinocytes
ASB for transcription factors
SNAI2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 0.45 3.91 0.724.7·10-6 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion ldl cholesterol years of education
GTEx eQTL Artery_Aorta Brain_Cerebellum Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Muscle_Skeletal Nerve_Tibial Ovary Testis Thyroid

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