rs6492251 chr13:110239494 C>T
- Sequence
catctcagctgtgcctcctactgt[C/T]ctgtttaaagaacaaccaatcaaa
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19239 (male B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.86 | -0.30 | 1.43 | -0.78 | Weak Concordant |
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Motif analysis
